Protein ZmBSD4 | |
---|---|
Information | |
TF Name: | ZmBSD4 |
Species: | Maize |
TF Family: | BSD |
Gene Name(Synonym): | BSDTF4 |
Uniprot ID: | B4FWY5 |
Subgenome: | 2 |
ZmBSD4 is a protein in the BSD family.
Overview of domains present in v5 transcripts | |
---|---|
PF03909 | |
Zm00001eb189530_T002 |
Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
---|---|---|---|---|---|
Zm00001d051702 | DAPseq | sequence | fimo | position | |
Zm00001d051702 | DAPseq | sequence | fimo | position | |
Zm00001d051702 | ChIPseq | sequence | fimo | position | |
Zm00001d051702 | PChIPseq | sequence | fimo | position |
MDLWERARAFAGEAAKRSQELSAEAAKRSSALVSETAKKSKEIFSETASKSREIAAEATKQADLLAGQIKHLASDLPVPS
IPPIPAIPPIPAAASSVPDAAELECYGITDDLREFVKGMTINTFRDFPLQDEPEVSDVPTVSNVRQDLNEWQARHGTLVL
SAVKEISKFRYELCPRYMKERKFWRVYFLLVNSYIAPFEKKYFEELKVKAEEEKKDSQKEASQASTTAEPKDTKVPSKTS
STNPEHDLDVFLLGDLGSDDEASVGGDDGLDDDFDKIDATSGLESDDDDKKAATGKAEGV
MDLWERARAFAGEAAKRSQELSAEAAKRSSALVSETAKKSKEIFSETASKSREIAAEATKQADLLAGQIKHLASDLPVPS
IPPIPAIPPIPAAASSVPDAAELECYGITDDLREFVKGMTINTFRDFPLQDEPEVSDVPTVSNVRQDLNEWQARHGTLVL
SAVKEISKFRYELCPRYMKERKFWRVYFLLVNSYIAPFEKKYFEELKVKAEEEKKDSQKEASQASTTAEPKDTKVPSKTS
STNPEHDLDVFLLGDLGSDDEASVGGDDGLDDDFDKIDATSGLESDDDDKKAATGKAEGV
MDLWERARAFAGEAAKRSQELSAEAAKRSSALVSETAKKSKEIFSETASKSREIAAEATKQADLLAGQIKHLASDLPVPS
IPPIPAIPPIPAAASSVPDAAELECYGITDDLREFVKGMTINTFRDFPLQDEPEVSDVPTVSNVRQDLNEWQARHGTLVL
SAVKEISKFRYELCPRYMKERKFWRVYFLLVNSYIAPFEKKYFEELKVKAEEEKKDSQKEASQASTTAEPKDTKVPSKTS
STNPEHDLDVFLLGDLGSDDEASVGGDDGLDDDFDKIDATSGLESDDDDKKAATGKAEGV
MDLWERARAFAGEAAKRSQELSAEAAKRSSALVSETAKKSKEIFSETASKSREIAAEATKQADLLAGQIKHLASDLPVPS
IPPIPAIPPIPAAASSVPDAAELECYGITDDLREFVKGMTINTFRDFPLQDEPEVSDVPTVSNVRQDLNEWQARHGTLVL
SAVKEISKFRYELCPRYMKERKFWRVYFLLVNSYIAPFEKKYFEELKVKAEEEKKDSQKEASQASTTAEPKDTKVPSKTS
STNPEHDLDVFLLGDLGSDDEASVGGDDGLDDDFDKIDATSGLESDDDDKKAATGKAEGV
MDLWERARAFAGEAAKRSQELSAEAAKRSSALVSETAKKSKEIFSETASKSREIAAEATKQADLLAGQIKHLASDLPVPS
IPPIPAIPPIPAAASSVPDAAELECYGITDDLREFVKGMTINTFRDFPLQDEPEVSDVPTVSNVRQDLNEWQARHGTLVL
SAVKEISKFRYELCPRYMKERKFWRVYFLLVNSYIAPFEKKYFEELKVKAEEEKKDSQKEASQASTTAEPKDTKVPSKTS
STNPEHDLDVFLLGDLGSDDEASVGGDDGLDDDFDKIDATSGLESDDDDKKAATGKAEGV
MDLWERARAFAGEAAKRSQELSAEAAKRSSALVSETAKKSKEIFSETASKSREIAAEATKQADLLAGQIKHLASDLPVPS
IPPIPAIPPIPAAASSVPDAAELECYGITDDLREFVKGMTINTFRDFPLQDEPEVSDVPTVSNVRQDLNEWQARHGTLVL
SAVKEISKFRYELCPRYMKERKFWRVYFLLVNSYIAPFEKKYFEELKVKAEEEKKDSQKEASQASTTAEPKDTKVPSKTS
STNPEHDLDVFLLGDLGSDDEASVGGDDGLDDDFDKIDATSGLESDDDDKKAATGKAEGV
Secondary Structure Color Code | |
---|---|
BEND | region with high backbone curvature without specific hydrogen bonding |
HELX_LH_PP_P | left-handed polyproline helix |
HELX_RH_3T_P | right-handed 3-10 helix |
HELX_RH_AL_P | right-handed alpha helix |
HELX_RH_PI_P | right-handed pi helix |
STRN | beta strand |
TURN_TY1_P | type I turn |
UNDETERMINED | no data available |
Domains Present | |
---|---|
PF03909 |
|
PF03909 |
|
Hover here to show all domains |
ACAAATTTTGATTTCACGACCCTAA...
ACAAATTTTGATTTCACGACCCTAAACAGTAAACATCCCGTTCTTTAAAGAACACCCCTCCAGTCAGGCCGTCCCGCGCCGACGTCAACGGAGACGTGTCAACGGCGGCGGTGATAAGACCCATAACCTTCTAGATTTTTTTCCGCTGCCTCAATGGATCTCTGGGAGAGGGCCCGGGCCTTCGCCGGCGAGGCGGCGAAGCGGTCGCAGGAACTCTCCGCGGAGGCGGCCAAGCGCTCGTCGGCGCTGGTCTCGGAGACGGCGAAGAAGTCCAAGGAGATCTTCTCCGAAACCGCCTCCAAGTCGCGGGAGATCGCCGCTGAGGCCACCAAGCAGGCCGACCTCCTCGCCGGCCAGATCAAGCACCTCGCCTCCGACCTCCCTGTGCCTTCGATCCCGCCCATCCCCGCGATCCCGCCTATCCCCGCCGCTGCCTCGTCGGTGCCCGACGCGGCCGAGCTTGAGTGCTACGGCATCACCGACGACCTCCGCGAGTTCGTCAAGGGCATGACCATAAACACCTTCCGCGACTTCCCACTGCAAGATGAGCCTGAGGTGTCTGATGTGCCAACTGTGTCGAATGTGCGTCAGGATCTGAACGAGTGGCAGGCCAGACACGGCACACTTGTCCTCTCGGCAGTCAAGGAAATATCAAAGTTCAGATATGAGCTATGCCCAAGATACATGAAAGAGCGCAAATTCTGGCGGGTATATTTTTTGCTAGTAAACAGCTATATAGCTCCGTTTGAGAAGAAATACTTCGAGGAGCTGAAAGTGAAAGCAGAGGAAGAGAAAAAGGATTCCCAGAAGGAAGCATCCCAAGCATCTACAACTGCAGAACCGAAAGACACAAAAGTGCCAAGCAAGACCTCTTCGACAAATCCAGAACATGACCTGGATGTATTTCTGCTGGGGGATCTGGGTAGCGATGATGAGGCTTCTGTTGGTGGTGATGATGGGCTAGATGATGACTTTGATAAGATTGATGCGACCTCGGGATTGGAAAGTGATGACGATGACAAAAAGGCAGCAACAGGGAAGGCAGAAGGTGTGTAGTAGTAGACTATGGTTTTGAGAGATGACGCCAATGATAGCGAACTTCAGGATTCCATGATGATATTGTATATTAGTTGATCGCATGCCGTATGTTCATTTGTTATCTCCCAATGAAGGAATGCTAAGCACTTGTTATTACAATTTTCGATTTTTTTTACTAAACTGAGACACCTATCTATGGATGGTGTTACTCTTTTCTTATTAGAAGTGTTCTGTGAACTGTCTCTACGAAATTGAACTCCGACTGCTCGAGACTGTAATTCACATGATGCACCCGTGTGTGAAGATAATAGATTTGGTATATGGTGCGATTTTTCAAGCC
MDLWERARAFAGEAAKRSQELSAEAAKRSSALVSETAKKSKEIFSETASKSREIAAEATKQADLLAGQIKHLASDLPVPS
IPPIPAIPPIPAAASSVPDAAELECYGITDDLREFVKGMTINTFRDFPLQDEPEVSDVPTVSNVRQDLNEWQARHGTLVL
SAVKEISKFRYELCPRYMKERKFWRVYFLLVNSYIAPFEKKYFEELKVKAEEEKKDSQKEASQASTTAEPKDTKVPSKTS
STNPEHDLDVFLLGDLGSDDEASVGGDDGLDDDFDKIDATSGLESDDDDKKAATGKAEGV
TACTGTTTATAGAGTTAAATTTGAA...
TACTGTTTATAGAGTTAAATTTGAAATAGTAGATGACATAAAAAGTCTGATAGAGATGGCCTAATCAAACTTTTTTTGTGCTATATCTCTCTGTATAAACGAATTACTAAAAACATAAAAAATCTCAATGAAATATATTTTATTATATTCTCTACAAATATATCAAATTTAAGTTATATCCTATGTTTAAAAGTTTTCAAAATACATCCAATATAAATAATTTAAAAATAATATAACTAGATGGATTAAAATTTAGTATATATAATAGAGTGTACGTATATTTGTTTACAAATTTTGATTTCACGACCCTAAACAGTAAACATCCCGTTCTTTAAAGAACACCCCTCCAGTCAGGCCGTCCCGCGCCGACGTCAACGGAGACGTGTCAACGGCGGCGGTGATAAGACCCATAACCTTCTAGATTTTTTTCCGCTGCCTCAATGGATCTCTGGGAGAGGGCCCGGGCCTTCGCCGGCGAGGCGGCGAAGCGGTCGCAGGAACTCTCCGCGGAGGCGGCCAAGCGCTCGTCGGCGCTGGTCTCGGAGACGGCGAAGAAGTCCAAGGAGATCTTCTCCGAAACCGCCTCCAAGTCGCGGGAGATCGCCGCTGAGGCCACCAAGCAGGCCGACCTCCTCGCCGGCCAGATCAAGCACCTCGCCTCCGACCTCCCTGTGCCTTCGATCCCGCCCATCCCCGCGATCCCGCCTATCCCCGCCGCTGCCTCGTCGGTGCCCGACGCGGCCGAGCTTGAGTGCTACGGCATCACCGACGACCTCCGCGAGTTCGTCAAGGGCATGACCATAAACACCTTCCGCGACTTCCCACTGCAAGATGAGCCTGAGGTGTCTGATGTGCCAACTGTGTCGAATGTGCGTCAGGATCTGAACGAGTGGCAGGCCAGACACGGCACACTTGTCCTCTCGGCAGTCAAGGAAATATCAAAGTTCAGATATGAGCTATGCCCAAGATACATGAAAGAGCGCAAATTCTGGCGGGTATATTTTTTGCTAGTAAACAGCTATATAGCTCCGTTTGAGAAGAAATACTTCGAGGAGCTGAAAGTGAAAGCAGAGGAAGAGAAAAAGGATTCCCAGAAGGAAGCATCCCAAGCATCTACAACTGCAGAACCGAAAGACACAAAAGTGCCAAGCAAGACCTCTTCGACAAATCCAGAACATGACCTGGATGTATTTCTGCTGGGGGATCTGGGTAGCGATGATGAGGCTTCTGTTGGTGGTGATGATGGGCTAGATGATGACTTTGATAAGATTGATGCGACCTCGGGATTGGAAAGTGATGACGATGACAAAAAGGCAGCAACAGGGAAGGCAGAAGGTGTGTAGTAGTAGACTATGGTTTTGAGAGATGACGCCAATGATAGCGAACTTCAGGATTCCATGATGATATTGTATATTAGTTGATCGCATGCCGTATGTTCATTTGTTATCTCCCAATGAAGGAATGCTAAGCACTTGTTATTACAATTTTCGATTTTTTTTACTAAACTGAGACACCTATCTATGGATGGTGTTACTCTTTTCTTATTAGAAGTGTTCTGTGAACTGTCTCTACGAAATTGAACTCCGACTGCTCGAGACTGTAATTCACATGATGCACCCGTGTGTGAAGATAATAGATTTGGTATATGGTGCGATTTTTCAAGCCTGACGTACGTTTTTACACCTGATTACCTGAAATAATGGGGTCTCATTGGACCACGGTAAAATTTCTCGCCTGAGATTTGGCGAAATTCGGTAAAATTTACTATTTCTGGTACTGATCAGGAAATGGTTTTCAAACCTATTTCGTTCAATTTTGTATTTTTTTTTGAAATTTCTGTAAAATCAGAAAAATATGATAAAAATAC
MDLWERARAFAGEAAKRSQELSAEAAKRSSALVSETAKKSKEIFSETASKSREIAAEATKQADLLAGQIKHLASDLPVPS
IPPIPAIPPIPAAASSVPDAAELECYGITDDLREFVKGMTINTFRDFPLQDEPEVSDVPTVSNVRQDLNEWQARHGTLVL
SAVKEISKFRYELCPRYMKERKFWRVYFLLVNSYIAPFEKKYFEELKVKAEEEKKDSQKEASQASTTAEPKDTKVPSKTS
STNPEHDLDVFLLGDLGSDDEASVGGDDGLDDDFDKIDATSGLESDDDDKKAATGKAEGV
ACCCCTCCAGTCAGGCCGTCCCGCG...
ACCCCTCCAGTCAGGCCGTCCCGCGCCGACGTCAACGGAGACGTGTCAACGGCGGCGGTGATAAGACCCATAACCTTCTAGATTTTTTTCCGCTGCCTCAATGGATCTCTGGGAGAGGGCCCGGGCCTTCGCCGGCGAGGCGGCGAAGCGGTCGCAGGAACTCTCCGCGGAGGCGGCCAAGCGCTCGTCGGCGCTGGTCTCGGAGACGGCGAAGAAGTCCAAGGAGATCTTCTCCGAAACCGCCTCCAAGTCGCGGGAGATCGCCGCTGAGGCCACCAAGCAGGCCGACCTCCTCGCCGGCCAGATCAAGCACCTCGCCTCCGACCTCCCTGTGCCTTCGATCCCGCCCATCCCCGCGATCCCGCCTATCCCCGCCGCTGCCTCGTCGGTGCCCGACGCGGCCGAGCTTGAGTGCTACGGCATCACCGACGACCTCCGCGAGTTCGTCAAGGGCATGACCATAAACACCTTCCGCGACTTCCCACTGCAAGATGAGCCTGAGGTGTCTGATGTGCCAACTGTGTCGAATGTGCGTCAGGATCTGAACGAGTGGCAGGCCAGACACGGCACACTTGTCCTCTCGGCAGTCAAGGAAATATCAAAGTTCAGATATGAGCTATGCCCAAGATACATGAAAGAGCGCAAATTCTGGCGGGTATATTTTTTGCTAGTAAACAGCTATATAGCTCCGTTTGAGAAGAAATACTTCGAGGAGCTGAAAGTGAAAGCAGAGGAAGAGAAAAAGGATTCCCAGAAGGAAGCATCCCAAGCATCTACAACTGCAGAACCGAAAGACACAAAAGTGCCAAGCAAGACCTCTTCGACAAATCCAGAACATGACCTGGATGTATTTCTGCTGGGGGATCTGGGTAGCGATGATGAGGCTTCTGTTGGTGGTGATGATGGGCTAGATGATGACTTTGATAAGATTGATGCGACCTCGGGATTGGAAAGTGATGACGATGACAAAAAGGCAGCAACAGGGAAGGCAGAAGGTGTGTAGTAGTAGACTATGGTTTTGAGAGATGACGCCAATGATAGCGAACTTCAGGATTCCATGATGATATTGTATATTAGTTGATCGCATGCCGTATGTTCATTTGTTATCTCCCAATGAAGGAATGCTAAGCACTTGTTATTACAATTTTCGATTTTTTTTACTAAACTGAGACACCTATCTATGGATGGTGTTACTCTTTTCTTATTAGAAGTGTTCTGTGAACTGTCTCTACGAAATTGAACTCCGACTGCTCGAGACTGTAATTCACATGATGCACCCGTGTGTGAAGATAATAGATTTGGTATATGGTGCGATTTT
MDLWERARAFAGEAAKRSQELSAEAAKRSSALVSETAKKSKEIFSETASKSREIAAEATKQADLLAGQIKHLASDLPVPS
IPPIPAIPPIPAAASSVPDAAELECYGITDDLREFVKGMTINTFRDFPLQDEPEVSDVPTVSNVRQDLNEWQARHGTLVL
SAVKSEGTGHVICDNKTITFSFFLFRLSNEDEALMDILANGKWFEKKYFEELKVKAEEEKKDSQKEASQASTTAEPKDTK
VPSKTSSTNPEHDLDVFLLGDLGSDDEASVGGDDGLDDDFDKIDATSGLESDDDDKKAATGKAEGV
ACCCCTCCAGTCAGGCCGTCCCGCG...
ACCCCTCCAGTCAGGCCGTCCCGCGCCGACGTCAACGGAGACGTGTCAACGGCGGCGGTGATAAGACCCATAACCTTCTAGATTTTTTTCCGCTGCCTCAATGGATCTCTGGGAGAGGGCCCGGGCCTTCGCCGGCGAGGCGGCGAAGCGGTCGCAGGAACTCTCCGCGGAGGCGGCCAAGCGCTCGTCGGCGCTGGTCTCGGAGACGGCGAAGAAGTCCAAGGAGATCTTCTCCGAAACCGCCTCCAAGTCGCGGGAGATCGCCGCTGAGGCCACCAAGCAGGCCGACCTCCTCGCCGGCCAGATCAAGCACCTCGCCTCCGACCTCCCTGTGCCTTCGATCCCGCCCATCCCCGCGATCCCGCCTATCCCCGCCGCTGCCTCGTCGGTGCCCGACGCGGCCGAGCTTGAGTGCTACGGCATCACCGACGACCTCCGCGAGTTCGTCAAGGGCATGACCATAAACACCTTCCGCGACTTCCCACTGCAAGATGAGCCTGAGGTGTCTGATGTGCCAACTGTGTCGAATGTGCGTCAGGATCTGAACGAGTGGCAGGCCAGACACGGCACACTTGTCCTCTCGGCAGTCAAGAGTGAAGGAACTGGACATGTCATTTGTGATAATAAAACAATTACGTTTTCATTTTTTCTCTTTAGATTAAGCAATGAAGATGAAGCATTGATGGATATATTAGCAAATGGAAAATGGTTTGAGAAGAAATACTTCGAGGAGCTGAAAGTGAAAGCAGAGGAAGAGAAAAAGGATTCCCAGAAGGAAGCATCCCAAGCATCTACAACTGCAGAACCGAAAGACACAAAAGTGCCAAGCAAGACCTCTTCGACAAATCCAGAACATGACCTGGATGTATTTCTGCTGGGGGATCTGGGTAGCGATGATGAGGCTTCTGTTGGTGGTGATGATGGGCTAGATGATGACTTTGATAAGATTGATGCGACCTCGGGATTGGAAAGTGATGACGATGACAAAAAGGCAGCAACAGGGAAGGCAGAAGGTGTGTAGTAGTAGACTATGGTTTTGAGAGATGACGCCAATGATAGCGAACTTCAGGATTCCATGATGATATTGTATATTAGTTGATCGCATGCCGTATGTTCATTTGTTATCTCCCAATGAAGGAATGCTAAGCACTTGTTATTACAATTTTCGATTTTTTTTACTAAACTGAGACACCTATCTATGGATGGTGTTACTCTTTTCTTATTAGAAGTGTTCTGTGAACTGTCTCTACGAAATTGAACTCCGACTGCTCGAGACTGTAATTCACATGATGCACCCGTGTGTGAAGATAATAGATTTGGTATATGGTGCGATTTT
MDLWERARAFAGEAAKRSQELSAEAAKRSSALVSETAKKSKEIFSETASKSREIAAEATKQADLLAGQIKHLASDLPVPS
IPPIPAIPPIPAAASSVPDAAELECYGITDDLREFVKGMTINTFRDFPLQDEPEVSDVPTVSNVRQDLNEWQARHGTLVL
SAVKIKQ
ACAAATTTTGATTTCACGACCCTAA...
ACAAATTTTGATTTCACGACCCTAAACAGTAAACATCCCGTTCTTTAAAGAACACCCCTCCAGTCAGGCCGTCCCGCGCCGACGTCAACGGAGACGTGTCAACGGCGGCGGTGATAAGACCCATAACCTTCTAGATTTTTTTCCGCTGCCTCAATGGATCTCTGGGAGAGGGCCCGGGCCTTCGCCGGCGAGGCGGCGAAGCGGTCGCAGGAACTCTCCGCGGAGGCGGCCAAGCGCTCGTCGGCGCTGGTCTCGGAGACGGCGAAGAAGTCCAAGGAGATCTTCTCCGAAACCGCCTCCAAGTCGCGGGAGATCGCCGCTGAGGCCACCAAGCAGGCCGACCTCCTCGCCGGCCAGATCAAGCACCTCGCCTCCGACCTCCCTGTGCCTTCGATCCCGCCCATCCCCGCGATCCCGCCTATCCCCGCCGCTGCCTCGTCGGTGCCCGACGCGGCCGAGCTTGAGTGCTACGGCATCACCGACGACCTCCGCGAGTTCGTCAAGGGCATGACCATAAACACCTTCCGCGACTTCCCACTGCAAGATGAGCCTGAGGTGTCTGATGTGCCAACTGTGTCGAATGTGCGTCAGGATCTGAACGAGTGGCAGGCCAGACACGGCACACTTGTCCTCTCGGCAGTCAAGATTAAGCAATGAAGATGAAGCATTGATGGATATATTAGCAAATGGAAAATGGAAATATCAAAGTTCAGATATGAGCTATGCCCAAGATACATGAAAGAGCGCAAATTCTGGCGGGTATATTTTTTGCTAGTAAACAGCTATATAGCTCCGTTTGAGAAGAAATACTTCGAGGAGCTGAAAGTGAAAGCAGAGGAAGAGAAAAAGGATTCCCAGAAGGAAGCATCCCAAGCATCTACAACTGCAGAACCGAAAGACACAAAAGTGCCAAGCAAGACCTCTTCGACAAATCCAGAACATGACCTGGATGTATTTCTGCTGGGGGATCTGGGTAGCGATGATGAGGCTTCTGTTGGTGGTGATGATGGGCTAGATGATGACTTTGATAAGATTGATGCGACCTCGGGATTGGAAAGTGATGACGATGACAAAAAGGCAGCAACAGGGAAGGCAGAAGGTGTGTAGTAGTAGACTATGGTTTTGAGAGATGACGCCAATGATAGCGAACTTCAGGATTCCATGATGATATTGTATATTAGTTGATCGCATGCCGTATGTTCATTTGTTATCTCCCAATGAAGGAATGCTAAGCACTTGTTATTACAATTTTCGATTTTTTTTACTAAACTGAGACACCTATCTATGGATGGTGTTACTCTTTTCTTATTAGAAGTGTTCTGTGAACTGTCTCTACGAAATTGAACTCCGACTGCTCGAGACTGTAATTCACATGATGCACCCGTGTGTGAAGATAATAGATTTGGTATATGGTGCGATTTTTCAAGCCTG
Copyright © 2023 Grassius.org | Last updated: 2023-06-26